CRAN Package Check Results for Package MLML2R

Last updated on 2019-07-23 01:49:56 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.2 1.64 31.76 33.40 OK
r-devel-linux-x86_64-debian-gcc 0.3.2 1.64 25.87 27.51 OK
r-devel-linux-x86_64-fedora-clang 0.3.2 39.34 WARN
r-devel-linux-x86_64-fedora-gcc 0.3.2 41.30 WARN
r-devel-windows-ix86+x86_64 0.3.2 5.00 58.00 63.00 OK
r-patched-linux-x86_64 0.3.2 1.82 31.98 33.80 OK
r-patched-solaris-x86 0.3.2 51.00 NOTE
r-release-linux-x86_64 0.3.2 2.28 31.71 33.99 OK
r-release-windows-ix86+x86_64 0.3.2 4.00 58.00 62.00 OK
r-release-osx-x86_64 0.3.2 WARN
r-oldrel-windows-ix86+x86_64 0.3.2 4.00 79.00 83.00 OK
r-oldrel-osx-x86_64 0.3.2 WARN

Check Details

Version: 0.3.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘vignette.Rmd’ using rmarkdown
    ! LaTeX Error: Missing \begin{document}.
    
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    Failed to compile vignette.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See vignette.log for more info.
    --- failed re-building ‘vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3.2
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'minfi', 'IlluminaHumanMethylation450kmanifest'
Flavor: r-patched-solaris-x86

Version: 0.3.2
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'minfi', 'GEOquery', 'BiocStyle',
     'IlluminaHumanMethylation450kmanifest'
Flavor: r-release-osx-x86_64

Version: 0.3.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘vignette.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 27-28 (vignette.Rmd)
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    there is no package called 'BiocStyle'
    --- failed re-building ‘vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.3.2
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     ‘minfi’ ‘BiocStyle’ ‘IlluminaHumanMethylation450kmanifest’
Flavor: r-oldrel-osx-x86_64

Version: 0.3.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 27-28 (vignette.Rmd)
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    there is no package called 'BiocStyle'
    Execution halted
Flavor: r-oldrel-osx-x86_64